{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "## Week 11" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Agenda for (04/05/2023)" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "- Lecture\n", "- Troubleshoot Anvi'o and DADA2/Phyloseq exercises if needed\n", "- Demonstration of Jupyter-lab and Biopython\n", "- Lab exercises\n", " - introduction to Python programming" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "### Resources for learning Python" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "Here, you will see a number of free books and websites that teach you how to program in Python.\n", "\n", "https://pythonbooks.revolunet.com/\n", "\n", "Most of the books are free and some are available in PDF formats while some are web version only. \n", "\n", "For absolute beginners who have no experience with computer programming, I recommend these resources:\n", "\n", "http://www.openbookproject.net/thinkcs/python/english2e/\n", "\n", "https://www.py4e.com/book\n", "\n", "https://books.trinket.io/pfe/index.html\n", "\n", "http://www.greenteapress.com/thinkpython/thinkpython.pdf\n", "\n", "https://pythonbasics.org/\n", "\n", "https://docs.python.org/3/tutorial/index.html\n" ] } ], "metadata": { "kernelspec": { "display_name": "Python 3 (ipykernel)", "language": "python", "name": "python3" }, "language_info": { "codemirror_mode": { "name": "ipython", "version": 3 }, "file_extension": ".py", "mimetype": "text/x-python", "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", "version": "3.9.6" } }, "nbformat": 4, "nbformat_minor": 4 }